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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38112087, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQVRNPILP GFNPDPSILR VGNDYYIATS TFEWYPGVQI HHSTDLANWK LLTRPLDRAS  60
   61 QLDMRGDPDS CGVWAPCLTH DGSRFWLVYT DVKRKDGSFK DAHNYIVWAD DIKGPWSDPV 120
  121 YANSSGFDPS LFHDLDTGKK WFVNMMWDHR RRPLLFAGIA LQEFDPEAGK LVGPRKNIYQ 180
  181 GTALELTEAP HMYKRNGWYY LLTAEGGTGY DHACTLARSR DVWGPYEDHP DKYVVTSKDH 240
  241 PLTALQRAGH GDIVDTPDGK TFLVHLTGRP TTQLRRCVLG RETAIQEAYW ADDDWLYVKN 300
  301 GPVPSLYVEL PGERDDTEYW AEQRYTFEGS LKELNPDFQW LRTPEPERIV KIQDNKLALI 360
  361 GRESIGSWFE QALLARRQTH FSYDAETVVD FGPSDERMFA GLTAYYCRYN FFYLTVTAHN 420
  421 DGQRELLIMA SEASHPVGGL RPDLLQQPVQ IPNEGKVRLV VTVRGRDMQF WYSMMDENEG 480
  481 KDLKKVGPVL DASIVSDECG GHQAHGSFTG AFVGMACSDL NGTATEARFD HFVYRPVKHE 540
  541 SDRPILLSVE LCLYVVANPS SCQGLAITMG RISLGLLLPL ILQASTVSGH GPDGMGLMGY 600
  601 GQLWADPNCA VSCRNVIAGA PLDCPDLHVD HGAHAGHGAP ALTAACIAEN LDFLGTLAYC 660
  661 MSIRCPADGV TASKLEWFWA TQATGDQSIE PGLSYGAVLA GLTERPSRTF QRGDTLNYTA 720
  721 YIADADYSYQ YKWNRFFDWE EMTQSTYVII IISVGVATPM VFSLMNHLPF VTTITDKLKP 780
  781 YLVYPSTIGT YSVRPLPYLL GHAPTRGQGL YIAMFTGLNI VLGAITYHNF EFAHPWGYSK 840
  841 SGEILAFVGY RTGHISFALL PLTVLFSSRN NVLLWLTDWP FSTFVLLHRW VARLCVAHAV 900
  901 VHSITMLQAY IGLGKYYTDV HTSYWIWGIV AMLCLVGLVS QGVLWLRRAS YEVFLLLHIV 960
  961 LAVFVIVGCW YHIIYWMGYT GVYELWIYMV SAVWFFDRMV RVLRVAKTGV RRATVTEVSA1020
 1021 DTVRVDIAGV RWAPTPGRHA YVYFPTLQPL RAWENHPFSV IPTALLRSPD AQPSPASSIK1080
 1081 RDPSNDVEGK GGMGSVASAV PASSRNGVSL YIRKRSGVTR LLREGNIPVL LDGPYRGTPT1140
 1141 RAVLQCDRII LIGGGIGVTG LLGWAGAHPN VKFAWSAREA DGTPILRDIG AVLDAVADKV1200
 1201 VQLERLDPEA LLEEEVRAGW GRVGVVVCGP AGLCDATRAA VVRLGRRHET VFELEVDAFG1260
 1261 W

YRC Informatics Platform - Version 3.0
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