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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38112017, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLKTLAVT SALALQAAAV NIRIDVGKNG LVFSPNSTNA AIGDVLEFHF YARNHSVVQG  60
   61 RFDQPCAPFP NNPFYSGFIP ASEGNENATV FQVTVASTAP AVYYCSQTQH CARGMYAVIN 120
  121 PSGQNTLQQY GSRVTANITA IDPPAGIRVP NGGVYSIQSS QQTSTASSAT NTPTGATTTA 180
  181 GAGRPTMTNN PTSTKSGFAV PTQAPVAGVV GVALAALIRF AAHVMVSAWV PGTPLQLPLL 240
  241 RTCSSAKLRH SSSNSVMNLL SVAFKSQTNK DATSPMQEYD RRVDEGILRN DEHQRVKHPS 300
  301 LEALKAPAQK SLFGSFFGSK GPKKAAIGDI PANLPRGLYL YGDVGSGKTM LMDLFYDTLP 360
  361 PSVKSKTRIH FHNFMQDVHK RMHKMKMQHG NDLDAVPLIA ADIAEQGNVL CFDEFQCTDV 420
  421 ADAMILRRLL EALMSHGVVL VTTSNRHPDD LYKNGVQRES FIPAIELLKS RLHVINLDSP 480
  481 TDYRKIPRPP SGVYHTPLDK HAQSHAEKWF AFLGDASDPG HPETQTVWGR KIHVPRVSGR 540
  541 CACFTFDELI GRPTGAADYI ELVRSYDAFV VTDVPGMTYR QRDLARRFIT FIDAVYESHA 600
  601 KLVLTTAAPL GELFVSREEM RESLAATRKK DAGREEPDDG DVEGAMGHMM EDLDSNVDKL 660
  661 RNSNLFSGDE EAFAFARALS RLSHMGSKEW VERGMGLESA GGKKEKDDWA KVRSKQMEDS 720
  721 M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle