YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145021286, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAERSLIFSP APYHIISYGT LLGTTFFQSF VNGIVAFRAL PRPQFSILQQ KIFPVYFVIQ  60
   61 SVLPVTLALT WPGSRNGLLS TASGIAGVLD EQNRWGVLVP IGTMFVTGVA NLLWLLPATT 120
  121 GCMLERRVQE KKDGKRSYDP APHSEEMKAL NKKFGILHGI SSLLNLGTFI ALICYGFTLA 180
  181 GHLH

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.90
Transmembrane Helix	15	37	0.87
Cytoplasmic	38	51	0.86
Transmembrane Helix	52	73	0.90
Non-Cytoplasmic	74	95	0.92
Transmembrane Helix	96	117	0.89
Cytoplasmic	118	155	0.91
Transmembrane Helix	156	179	0.89
Non-Cytoplasmic	180	184	0.81