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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39946052, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRTSVSLPT NNKVARDPYE KRARYEANQR EVGLFEKITE AMSQARQTRW FKTLAVLVVI  60
   61 LFLFFFLSPS GGVDLYKSGV PSAASPNSGQ APADASYGTD KCTRSFSKDK PIVQYVLMID 120
  121 AGSTGSRIHV YKFNNCGAAP ELENEVFKQT EKREGGSGLS AYPDDPEAAA KSLDVLMEAA 180
  181 VKEVPEKLRS CTPVAVKATA GLRLLGDVKS GKILEAVRRH LENDYPFPVV ADQSGVSIMD 240
  241 GKDEAIYAWV TVNYLLGKIG GPDKSETAAV LDLGGGSTQI VFEPTFKGAP NGGMPTKLAE 300
  301 GDHKYELQFG GRHFELYQHS HLGYGLMSAR EAIFKALIDE IYSSKKGDKS WLNAPVVNPC 360
  361 FGAGMTKTIK VKFGEGHPLG KEMEINMTGP KSGAPAQCRA LAEKILKKDA ECKLAPCSFN 420
  421 GVHQPSIAKT FAKEDMYFLS YFTDRAEALG MPESFSLKEM RDLAEQVCGG KESWGVFSGV 480
  481 KGALEELEGR PEYCLDLNFM LALVHTGYEM PIDREVKVAK KIKGNELGWC LGASLPLLAK 540
  541 GSGWTCKIAE VH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle