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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39971919, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFQLTVGTS AKGPLLLPMT GPLISTHGPA HSGFPWNKRE CMAWMTAPRS PPNSPRLPLS  60
   61 KFGTLHSNTS CDLKLGGYCK LRNGTFVIPT TGERSRRQFT LRHAPTGLEN ANNNSDLSRN 120
  121 DDDDESSSGM FSRKTLAKPF RYATHGLLEA CLNLYKFLGT PKGRGVLKCT LAYVLASLMT 180
  181 FIEPASDFLG KRDGKHVVAT ITVYFHPARS AGSMIEATLI AIVAVAYAAV VSLSSMATSV 240
  241 FVGSVLDKPT LAHILVLVFF VAGGFGFIGW VKQRMNNPLV NVGGTLASLA IISVVTRENA 300
  301 TFASVWDNTK MVQVFKMLVI GITITASVNL LLWRTFARDT LRKAMGTSST SLGEMLSYVT 360
  361 HSFLSGKEEE LLSEQFSSSV SVYHTSYTTM TNVLREAKYE HYFLGHERVY SLDKAVYKSI 420
  421 ETLAQSIGGL KSAANTQFAL LRESAATAVD PDGQRTGDVS PTSIGPPTLF SPSLLSRSFS 480
  481 SSLKSGLGRH PALSAIDEAT DEGSSQEGSP RPFVRRSNSE SNATQTTQPA VFRTSSDIFS 540
  541 LFIELLGPSM KSLAFTLSEI LREPAFGAAP HYVVNLNDNF RPSLMDALGL YNEARGKALN 600
  601 ELYKNIELGR PNYSDDLKAD FEEVAAACGH FSFSLQTFGE EMSKYLDVLD DLKHAAEDGK 660
  661 AGRSWEWLRF WRKNRAHSLF NTATTLPYEH RDQDQESLVR PIRRSQLPKG IPSTMTSHRD 720
  721 TYSWQLAGDE ANKHVSRFAQ GLLRWARRWA RDDFRFGLKV GIGAMLWAML AFIPSTRPTY 780
  781 SHWRGEWGLL SFMVVCSMTV GASNTTGISR FIGTVFGTAL FLVNWTVSDG NPVVLAILGG 840
  841 FVAFYNFVVI VARGNAPLGR TALLAYNVTA LYAYSISQRV DDDDDDEGGM NPYIGEIALH 900
  901 RSLAVTAGII YGLFVCRVVW PISARKKFKE GLSVLYLQMG LIWKRGPLAI LLRSDCTRSY 960
  961 LKSGEQVALQ RYASRLETLR RAAASEFELR GPFPFDTVGR ILAATNRILD AFYAMSLVTQ1020
 1021 RRGHLSDGER ELLLFTAKER AVLCDRICHV FQVLASSIML EYPMTESIPS VTHTRDRLLG1080
 1081 KIFWFRKEHA AAGAALAAVE GSIIADEATS AMGMGSSRPP PPPAPRRRSS EASVVDKLGD1140
 1141 WARIGAVTVE ERDYALLYAY ALVTGQVAEE LKMVEKEIEN LYGVFPDDVN LLE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle