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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39971881, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSRNIISSS VPTWVQRERG SPNSSSREMV NSTRAQRGSL SNGSSEKELG IAAWTQRNSP  60
   61 SSSTRELGWR MEGFAAQLET AFDTHAEEHI GQLYRPSSLE EKGPILSHFK RESDLTTNTT 120
  121 PPPPPPPPPR PPRSNDDVFD FGQGCRADDE EQDNHHNSNN NNNANNSNFD TDEFQIYRDG 180
  181 SLILVPAPTN DPRDPINLPM VRKVVAIFFL SFFGALAASA EIILGAVLPV FALEYSGLFP 240
  241 DPGRSLRDLI NAGGFPQGEN PLKLLDHLGS GPSVFAIYML ASAPLLIIGL SNLFLVPMAI 300
  301 SCGRRPVLLA TSLIAIAGAV WAGASKSFES HLAARCVQAI GAGTVESLIP FIIQDMVHVH 360
  361 QRNTWISAAF AAQGVIIIGI GFSTPTIITE LSWHYVYFIT AAAAGLFLIG IFFSLPETRW 420
  421 ERTRAEMAGI PRDDSHIKYK PRSYKDDINP FPVDINWKAG VTAFLDTMRT FFYPQVFFVT 480
  481 MLNSVVISVT FAAGLTATPV LISKPYSWPF ERIGFSLTAV LIGAIVVALV QGPLGDNLAN 540
  541 FMAKRTGRRT PENQLINLVL PITLALIGSL LFGLAGQHPE TYGWPVFLAS FAFIAYGFLG 600
  601 TSSTSSVYVL ECYPHLAGPA LVSIASFRFI FAFLLTFDAS NWVINLGYFN AFMIYVALIS 660
  661 FFVLFLPIVF IYGASWRKRW GQSYTYTNCH DDQEDGTFNG LWQLTSPAFR FQPVSVVKFE 720
  721 PTRLAVSSDS GVMGDIALRL APCYLSGAIS SGSDEVGGKD GEKNGKEFHA STNHSFVISV 780
  781 EAKRLSDIQT SSPSSDKHCH LKEKKCREGR DIETNQHPTR RPTAETNCTE PSPQPASVHS 840
  841 DQSPLYRLEN APSNSIRTNP IEMASSLRTT ASMAMRLKPT ASLIPYRSVA ALSSSSRSPA 900
  901 AVPAAQSSTG LARPERKEVP LPSQEGTKGV VQYALTTLDI IANWGRQSSL WPMTFGLACC 960
  961 AVEMMHLSTP RYDQDRLGII FRASPRQSDV MIVAGTLTNK MAPALRQVYD QMPEPRWVIS1020
 1021 MGSCANGGGY YHYSYSVVRG CDRIVPVDVY VPGCPPTSEA LMYGIFQLQR KMRNTKITRM1080
 1081 WYRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle