YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GET1_MAGO7
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLLILIFT IEVAVELINT IGAATINNLL WRIFNALPTK LSAQFAEQRK LQQDYLKVRR  60
   61 ELNATSSQDE FAKWAKLRRQ HDKLLEQLEK KKAALDSTKG NFDKYITGIR WVGTQGLRYF 120
  121 LPFWYAKVPM FWLPYGWFPY YAEWLVSFPR APMGSVSIAS WQLACTGFVV LIKDAITALV 180
  181 VFVMGMRQSN VKQAVPVKAV SGEKASDEKE GKKEL

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.50
Transmembrane Helix	8	30	0.52
Cytoplasmic	31	119	0.92
Transmembrane Helix	120	138	0.84
Non-Cytoplasmic	139	157	0.82
Transmembrane Helix	158	183	0.81
Cytoplasmic	184	215	0.92