YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RM04_MAGGR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSGAARPA ASRVLQRCQP FSSSTSCAAP VTTWRTLARP STAAATAQAT TQQLRLLSIS  60
   61 MPLQKRRTTR DNNRLRGQST IHRSGIRRPL SVSEEDIPQP VQDEGVGKMR EEDTDPDHGL 120
  121 WGFFYDKQLV PTPKQLSAHG RSWTVQELRG KSWEDLHALW WMCCRERNRI ATAIRTRQFI 180
  181 GIKKDNPFDE AEARGRTVNK TMQAIKHVLT ERFYAWEDAR KLAMEDPEIN LSGKGPIYTP 240
  241 SLHFESADTS SYIEEPVADH LETPETSGQE KVGELSPAGA VDPSTILASK TGKPVTDAPR 300
  301 SS

Type	Start	End	Confidence
Signal Peptide	1	38	0.57
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	302	0.99