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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHO2_MAGO7
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATTKGGQE PVAPTNIRKR RGVQAEGDTE SSTAQDGIGH APTAQYEQSE DQEQAKLRQA  60
   61 NKSYGRTPDG TVFTVPTTHD MVSQLLDPRQ PKNLSDVIVL AILGMHILAA YALPSHLKRP 120
  121 VFAAIFIFWR ASYNIGIGIL LRVQSQHKLL VVKAKKWGIF EDPASGKNPR PWLYHLLKRE 180
  181 LEAKIPEDYK LEEAPIEYNT WLLFRRVVDL ILMCDFVSYC LFAAVCGSTP DGEAPWATVA 240
  241 RWVMGWVLVG LNLWIKLDAH RVVKDFAWYW GDFFYLIDQE LTFDGVFELA PHPMYSIGYI 300
  301 GYYGISMMAA SYDVLFISII AHLAQLIFLV VVENPHIEKT YNPPPPRSAG QMQPLDGAKD 360
  361 ADSATRDSPA TVHNMLGFKN IDLFRVPDYT TILLCIYLGV LSLATPKTEF WQAAFIVHAV 420
  421 LCRLWFSLGL GWILTFQSKE KRFTRHFVKY GESAGEAWRQ WKGLYHVSTV MCHGSFIAAC 480
  481 WKMYTVPADW TQEWSILKHV TGTGLVALQI WTAVSIYDEL GEFGWFFGDF FFNNRTKLTY 540
  541 RSIYRFLNNP ERVMGSLGLY GAALITWSRA IFVLALISHL LTLAFISYVE KPHMQKIYGQ 600
  601 SIREEAGLTK FVKRSLPPPV KEWSDSVDKV LDEAKAFVED FVESARPKLA AGVSTIVRDT 660
  661 TALFNTYPAR LTISQLNPSL AGLDPKQYSL SLEGTVAQKA ASGRSTGKES IHGRFPKDVK 720
  721 TLVLEYGAPI RVKWTAPANH SKNDWVGLYM VIDNRSREVT EVPSQGRWVP TCPGVYDRAT 780
  781 DGGIITADKP LPSQPDMVQG EMVFEGDRLW WTQGTFELRY HHDGSHNVMS VSEPFEIKIG 840
  841 RFDEDLDEEV LATGGGVYER AVESELLPLV RNCLDRDPEI APSTVDEPFG SPVERDSKYA 900
  901 KRVVYAIHHM FGIEFAPAVV PADGNVRKLA WRICNAKQVL APYSMSKSRG TTTPLGEKFL 960
  961 ETL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle