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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145016060, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPPDSSRQT GRHREAGSRK HHKRKSSSHA HRQSRTDESG SSNGRPLSID ALARLNEVNA  60
   61 TRSPRHQSRD RDRERDRDVA RDKERHRQRE EEREYERVRV RDHERSRDQR RERDSRARRP 120
  121 ERTEYKEVDR LEDAHRPKKD KKRKKRIVSG AALEEGRGKD LRGLRGGGHS SSDSLEKEPL 180
  181 QPKKQPRWKN KKFLCLIGIG IGIVLLILII AVAVVVSKQN NNADSSDPKS NLKDIDRNSI 240
  241 PPGAPSYLNP FEWQDTKDFN LTYTDQTVGD LPVMGLFSSW DDSKRANDNV PPLNKPWGSY 300
  301 ASRPARGVNL GGWLSIEPFI TADLYDWDQR TGVIDEWTLC SRLGSACPAF LEKHYSSFVN 360
  361 EQTFKDIQAA GLDHIRIPFS YWAVQTYDGD PYVFRTSWRY LLRAIEWARK YGLRINLDLH 420
  421 GLPGSQNGWN HSGRQGEIGW LNGTDGALNA QRSLDIHDRL SKFFAQDRYR NIITHYGLAN 480
  481 EPKMTALRAQ DVVDWTSKAY DLVRKNGIKD AIVVFGDGFM GLYKWQGQLT GYGNGLALDV 540
  541 HQYVIFNSDQ IAYNHTRKIE YACDGWTKQT TESMNTATGF GPTLIAEWSQ ADTDCAKHLT 600
  601 NVGWGNRWTG TYRSGDPSSE ALSPRCPTKD SRCECGTANA DASRYSDTYK TFLRTFAEAQ 660
  661 MHSFEKGWGW FYWTWDASHA QWSYKKGLAA GILPAKAWER SFNCDLGNIP SFAGLPETY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle