YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NCB5R_MAGO7
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPLSSKVY VDGVYIPAAL IVIGTAIVKR DWVVYSVALA LALGTWKFFQ LKPKKVLDPT  60
   61 KFQEFELKEK TIISHNVAIY RIQLPSPSSI LGLPIGQHIS IGADIPQPDG SSKEVVRSYT 120
  121 PISGDEQPGY VDLLIKSYPT GNISKYMAGL SVGQSIRVRG PKGAFVYQPN MVRHFGMIAG 180
  181 GTGITPMLQV VRAIVRGRAA GDTTQVDLIF ANVTKEDILL KEDLDALAAE DKGFRVHYVL 240
  241 DRPPEGWTGG VGFVTQDMIT KWLPKPADDV KILLCGPPPM VSGLKKATEA LGFKKARPVS 300
  301 KLEDQVFAF

Type	Start	End	Confidence
Cytoplasmic	1	8	0.57
Transmembrane Helix	9	27	0.55
Non-Cytoplasmic	28	309	0.53