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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38110626, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLRITFLHR PGDAVDPASL KITDDSLAGP DLHAAREVRA TFARDELPAE LLALLAATND  60
   61 FHVRWVGPHA YQTVSPLQSR LPPGFHLFYT PLADEKHQDS AVLTCDLLRK AFGGLENCIS 120
  121 NESFVSLPKS RFSHSPAHQF YQPLEDLRNL TRYIRDDLCP ENDPLCRAQA ERLTESVSLD 180
  181 ISWDSTANIL RVTTMSPYQA QPLTVTAYPG HRTEVGMLGE DTAPTLERHE VGISGHLVVL 240
  241 GERNTPSPTV FGFPSRHRAA DGDSVTSFFP YHSDTSTGLH PTLRLVMTSR KPDEGSCTPH 300
  301 AYLTLPRTIF ADMYQLSDPL FLASKNLTAL RYMSSPVDLE APDYAMSIWG SFVLVDLAQP 360
  361 SVDAGDAWTA EIPLHLRYLA PATGGHRSIE VPAPAVFWAC AADEVGNLAT NPFDRTRLGY 420
  421 DGLFDVNTVF WHLEPRPPPL PVGTTRLVLG VDVPVLDIER SGWIGAGTAA VILLGFGWVV 480
  481 WKLLGAGLAK SAEGGMAPGV QKPETKKTQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle