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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39952467, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFEINREP SKPAPADRLV LFVGDGLRAD KAFQSHPEPY PKTDEDLTPR PLAPFLRSRV  60
   61 LEHGTFGVSH TRVPTESRPG HVALIAGLYE DVSAVMTGWK LNPVNFDSVF NRSRHTWSWG 120
  121 SPDILPMFEK GAVPGRVDAY MYEAEDEDFS QDATHLDYWV FDHVEEMFTE AKHNATLAEA 180
  181 LRQDKVVFFL HLLGLDTAGH SFRPYSPEYL HNIKVVDEGV SNITRIVNEF YGDDRTAFVF 240
  241 TADHGMSDWG SHGDGHPDNT RTPLIAWGSG VAKPRVATGD APAAGHDEFS SDWGLDKVQR 300
  301 HDVAQADVAA LMAFLIGVEF PANSVGEIPL PFLTASNKEK AEATLVNAQG ILEMYRVKEE 360
  361 KKKGQSQLRF KPYKALAGGA QNGSRGIEER VADIRRLIDG GNHEEAIEES AALIKVGLEG 420
  421 LRYLQTYDWV FLRALVTIGY LGWMTFALMT VLDMHVLHGQ VQPARDGMGL AASTAVLVLL 480
  481 FASFIASGSP PTYYAYAFFP VFFWEEVYAR RQSLVQGRRL LFAHIKPGVS LASFVLNAAV 540
  541 YVAVIVSLAH GYIHREVLTG LFILGAFWPA SYGISFLQEH AALAGTWFVS CLGMSTFTLL 600
  601 SAIKIENLDL ILIGGALMVV IGLTYLSLES FVLRDFSSDT TPPVKKHVNR ALVGAQIGLV 660
  661 ILAMLVTRST VIALKAKKGL PLGNQVAGLF VLISSFILPI AYRVEPNNHY LHRLMVAFLT 720
  721 FAPTFVILTI SYEGLFYVAF CITLVAWVRL EHAGHIYSSR QAAAGKKISA NGATTLAPAQ 780
  781 PSDPSPAATN KYRALTLTDA RVALFFFVLL QSAFFSTGNM ASVSQFSLES VNRIQPIFDP 840
  841 LTQGVLLTLK LLVPFAILSA NVGVLTRRLG VPPSALFMLV IAVSDFLTLY FFWVVKDEGS 900
  901 WLEIGSTISH FVIASMMCVF VALLEGVSTL FVAGVKVSEE GRSGGRRDAD AKVAPTRSNG 960
  961 KTATKALDG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle