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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39952113, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRKRLRDA SLSASANSSS TGNKRQKTKL NLPTVPPRKA TLFDSIDTVS TPGASAKTRS  60
   61 PADILGVSDE DDSSLSSLSD EEFKDVVAAA DRSLDMADED DDGSDDDDDD IEFEDVQASL 120
  121 APFAEEAAPS GDLELTLDLD GRISLTNEYG NKKGPSKRER ITRNAVHRVH VMFLMWHNAV 180
  181 RNSWLCDAEV QGLLLSHVPP RVWEEYERWR RASALDRASE TPASRSNAPK TKGKGKGSAK 240
  241 ETARPSRRDW GDAAQRLENG TVDMSHGDPL FRLMKALSAW WKQRFRVTAP GLRKVGYMSL 300
  301 ERLDRLTKGF KNGDKNTALF GERIGSLDEF RLCAQSCTGS RDVGAQLFTA LLRGLGLEAR 360
  361 MIASLQPLGY GWSKYEDADP EEERSSQPSP EKPTQTTQTP QKNTKNEPRR QHVSSRSRGK 420
  421 QSKAIEEEDS NYVDDFEPQE VNSDDEMVVE VPKKMAPQSK KFDQDLEFPH YWTEVLSPVT 480
  481 HKYLAVDPVV KFVIATNREL VESLEPRGSR TEKARQVMAY IMGFSSDGTA KDVTVRYLKR 540
  541 QMLPGRTKGV RYPIEKVPVY NHKGKVKHYE HVDWIKSVLR GYVRGNKRHP ITEVDEEEDS 600
  601 TDLRPAKHEK KEVKEGDETL QYYKQSKEYV LERHLKREEA LLQDATPVKV FKVKAKGGEF 660
  661 TEENVYLRRD VVQVKSAETW HKQGRAPKEG EKPLKMVPYR AATMNRKRDI AAAEAATGKK 720
  721 VLQGLYSMDQ TDWIIPPPIK DGIIPKNEYG NIDLFAEHMC PQGAVHVPFR GAVKVCRRLG 780
  781 VDYAEAVIDF EFGHRMAVPV IQGVVIAEEH HDRVMEELAK DEAERARKED AKRTAAALAM 840
  841 WRKMLMAMRI TNRLREEYGN VGDGDLRIIQ TSRSRADETT HRPADASAGF DEDTAGGFLP 900
  901 AGYECESQET EDKAVENQEA PRVSSYFPVA GEDDEDDDDD LVVEDAQMDD ATSPALAGGS 960
  961 AIIGDTERSG EHGDALASDG EQHQADAPVM EEDAVYSNGS SRSAASKRRR ATVEASPATR1020
 1021 VRPSRQAAKK AKPKLKQLES DIDTQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle