YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39952077, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSTPPTP LLYTILTECT TSASSQTSSL ASLVLPKITH TSPQKLTYTH GAHHIHYIAE  60
   61 APSDHGPHAA SAGGLTFLVI ADSSVGRSVP FGYLFEIRRR FLEEYPPGST DFADQPNYGA 120
  121 ASFNGELRRL MVEIGSTRQG RDDAVQNAQR EIDDVRGIMT RNIEGLLERG ERIDLLVDKT 180
  181 DRLGGSAREF RVRSRGLKRQ MWWKNVKLMG LLGLVMFLIL LTIIIAVKNS

Type	Start	End	Confidence
Cytoplasmic	1	204	0.84
Transmembrane Helix	205	227	0.91
Non-Cytoplasmic	228	230	0.87