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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38109832, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNGPATKI GAPMPDKDLE KKPMELYPMV SWKYDTLLWV MSIIADLFFR EIHPRSSWKI  60
   61 PKHGPILFVA APHANQFVDA LVLQKTLKKE AGRRVSLLIA QKSIHGFIGW ASRQVGCVPV 120
  121 GRAQDAARPA TGTIYLPNPI YDPTLIRGVG TKFDIEAEVG GSLFLPSVKG QTGSHVEIAE 180
  181 IISPEELRIK RALKGKLPME QLTGRDDVDQ DGIFKNKEVR SRKEGYQGTK YKLAPHIDQS 240
  241 KVYEAVFQRL RSGGCVGIFP EGGSHDRTEL LPLKPGVAIM ALGAMANYPD VGVKIVPVGM 300
  301 NYFHAHKFRS RAVVEFGNAI EVDPELVHMY KNNQRREAIG TLLDTVHQGL SAVTVSTPDY 360
  361 DTLMLIQAAR RLYNPTGKKL PLPVVVELNR RLAVGYERFK DDERVIKVRE SVKKYNKNLR 420
  421 YLGIRDHQVQ VTRMSWHRVV RIFLYRILQL AVFFVATFPG LVLFGPVFIV AKVISIKKAR 480
  481 SALAASTVKI QGRDVMATWK LLVSMAFAPI MYHVYCSLLA WKVARDGLWG FVPAWIVSLP 540
  541 WFVLVASIWL IGWPTFISIT FAALRFGEIG MDVFKSLRPL LLCMFPSSKY NMQKLQEQRA 600
  601 ELSAEVTNLI NTLGPEIFPD FAQSRLIKAS MDQHGAPLSP THTRQPDSPT LKRRSDSELS 660
  661 FTGQASPGTS LHHPTSSNGI QRRNTQSSRA IPRNESFSNI GKAGIFATRP PSRNRSRTSS 720
  721 MGGFNVQAFT ALDSQEGFDE ASRKIREAMR ERGEMRRRRS EARGMMIGGS EDEEEDHDDE 780
  781 NSSDGKKNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle