YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38109735, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVISKEEEA AHYSATIKGG LVGGSVGLAL GLAGVVGASK RYAAFRSLTL PFRAFLVTSS  60
   61 GTFGAITVAE RYSIAFAKQQ DPMNFYKDES TRVLEEARQQ ASQMQRLKDW GRENRYTIVF 120
  121 ASWLASMGVA LAAVGKDKYL TTAQKLVQAR VYAQGLTLAV LIATAVFETA DAKSGRGRWQ 180
  181 TVMVVDPNDP EHKHLIEKKI HKEEYEGQDL WMDMVAAEEK RIANQKKVRE EAAAKVNGEA 240
  241 KKENSGKTEA ASA

Type	Start	End	Confidence
Cytoplasmic	1	16	0.82
Transmembrane Helix	17	38	0.88
Non-Cytoplasmic	39	49	0.69
Transmembrane Helix	50	69	0.84
Cytoplasmic	70	115	0.88
Transmembrane Helix	116	135	0.92
Non-Cytoplasmic	136	150	0.84
Transmembrane Helix	151	170	0.81
Cytoplasmic	171	253	0.86