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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39958959, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTPNCWRCL LRPSMAAIKA APRRVAMPGI LATMPGPMTT AAAFSVSAPV AASAPTPAAP  60
   61 KKRKGNASRK KKTYKPTGKS PLPGERKAFR KRIQLSNNNA LRVEGLQTLT RQVIGDRKSI 120
  121 GSVCALSEPV VDQLRAVEAF KHTQTWGLFH APHTLIRTET VELAERIQKA AVNKENLRMV 180
  181 ISGDKVTGKS TLLLQAMTTA FLNDWIVINF PEAQELTTAC TEYAPLPGTT PQQYMQPVYA 240
  241 YNILQQMRKA SGHILQTMTV LNKHQDLSLE IITHASSLLD LIDSCKETET AWPVLQALWT 300
  301 ELQTPSKDRR PVMVTLDGLA HIMRTSDYRS PAFELIHSHD LTLVRWFVDG LSNGNGFNGF 360
  361 PAGGAFIAAE TKGNSPKSFS VELAIAQREA VQRGEEPPAR DPYCRHYDAR VDEALKDVPV 420
  421 LRLGGMSRAE TRSLMEYWAA SGLLRDAVDE KKVTDVWSIG GNGNVGEMER AALMTMKM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle