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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38109647, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAEQLRAS IIPEYQWYYL DYPGLKAELK QPSGPIQKDT GVREWSEDDE TRFVRKLEAE  60
   61 LEKIHQKQQV KSIEITRRIA VCEKEVMDTI RRQNERGTGP GPTEEEFDLH ESDLSDIIAD 120
  121 VHDLAKFVQV NYTGFYKIIK KHDKMTGWHL KPVWDSRLKA KPFYKENYDA QVVKLSKLYD 180
  181 LARTRGNPVQ GDSAAGGGQA SFVRNTTKYW VHPDNVTELK LIILKHLPVL VFNASKEFEV 240
  241 ADSAITSIYY DNPDTWELYE GRLKKTEGAE AIRLRWYGGM DTETIFVERK THREDWTGEK 300
  301 SVKARFPIKE KNVNSYMKGD LLPAAVFEKA RREGKKPQKV LDEQERLAAE IQYSVLKKGY 360
  361 KPVCRSFYNR TAFQLPADAR VRISLDTELC MIREDDLDGK KRAGDNWRRM DIGIDHPFSQ 420
  421 LPPEDIVRFP YAVLEVKLQT HVGQQPPDWV RQLISSHLVE SVPKFSKFIH GCASLFEDRI 480
  481 NLLPFWHPQM DVDIRKPRTH NFGIHRPAAN SAATATTDDE EDELDSDEEE AEDAGKNGVA 540
  541 SSHAANGNGE SSSRGLHRGQ RAQDVEDQTV AQPVADEDYP VYDSDVEEDE DVRLEEARRV 600
  601 GGWDYYSTLF SIYSGKAAHT GLAVAKALIP RPRGSAIPRS ERNEALWGSE DTSLKRFKAP 660
  661 KGKKIHVPVR VEPKVYFAAE RTFLGWLEYS IYVGMIATTL LNFGDKPNSM AFVVAGAFTI 720
  721 VAILCLIYSV AIYLYRSRAI RTRRASAKYY DKLGPSALCV TLFLAVALNF GFEGYKRSIW 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle