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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38109549, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVASWLFGT AYGAPKDKDI WLWVDKELRS DFFQINICGL TLDYKGTLKW TRHDAVCDAR  60
   61 WPLDGNAGIR CYVHQHISSV LHLIAKRTSS YWQYRGARPV PSRSIRLPIM ARRIVRTAIQ 120
  121 VVTAALACFL IVFFLDRNFR VLPNSIHEYM PQHHPGLLVT DITIQKCSSL NPFSSCKLDP 180
  181 EIWHRVEKDL YLGKALASSA WLHIRRQKES ELKGDDKVVI DVTVGRLDPS ENGKRGQSGE 240
  241 AWESRPGGLW LKRSGKLHAG DSDRAVTTVD LLFGDDAVEV RPGWEIVGTP LILDASSSIP 300
  301 SAHLTVRRGS HPAEIPKPKL RVQENGNFKV MQVADLHLST GVGHCRDAVP DSYHGGRCEA 360
  361 DPRTLEFVSK MLDDEKPDLV VLSGDQVNGG TAPDVQSAIF KYAALLIQRK IPYVSIFGNH 420
  421 DDEKGVMSRA SQMAIIEALP YSLSTAGPED VDGVGNYYIE VLGRGMSSHA AITIYMLDTH 480
  481 SYSPNERKYP GYDWLKKSQI DWFQKTAQGL KQKHKAYTHI HLDVSFIHIP LPEYREPDQL 540
  541 MVGKYVEPVT APVFNSGFRD ALVSEGVTLV GCGHDHVNDY CALSMNEQEP KMWMCYAGNV 600
  601 GFGGYAGYGG YDRRIRMYEF DMNEGRITTW KRLENAEDKS LLKQRIDEQL AVDAGKAHPP 660
  661 PEDVNDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle