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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38109542, gi|...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLAWYAGAS TALAGGVVFS AFNQRANFYS AMVHLSQSNL SIMLRPVEIE QLYEKAWFAV  60
   61 TETCLAMTIF REEIGAFFIV MFTALLTGKV WGWIGDGRVE VLEQQPPANP RLFHARLSIS 120
  121 LVVSVIYDIW LLQYATRTVI QQARPNMTVM FLFEFAILLV CSVQTGLRYI VSLTEQSILK 180
  181 TQTRQGLEAR RRQIREQRAD ILRRRESGEA TEEEMNEPLP DENDVEEMDI EVPGWEAKGH 240
  241 WILVLDLCAD FLKLGIYGAF FALILIFYGL PIHIMRDLFM TTRSFVKRLG ALLRYRQAIK 300
  301 DLNRYPDATE EDLNRENTCI ICREEMHPWN ANDAARIERT RPKKLPCGHI LHFGCLKSWL 360
  361 ERQQVCPTCR RSVVIGAPEP GRRDANPPPF RAAGVVPGNP ANLAPQPPAG NVPNNHQQPQ 420
  421 QPNRPNVRMF DLGPIRLGFA RGGAQDLQEM AQMMGVPAPP IPENNQAAVQ NPVLPLQPGI 480
  481 VAPSNVEAIQ AQLRAIEERI QTEAFSIRFA QQEAQVLRLL LQQLEMIRHA QAINLAGGQD 540
  541 AVGPQSFASG SGAQPQQAQH QSTVPDSQTS NHGQQPGATD SSSNPGAATT ISQAPLGGLQ 600
  601 QGGPSVHNLP PAVQSLSPVA GAGSVGLSHH TVAPNTTPIP AGSSDLPEGL VLPPGWSLLP 660
  661 LKRADGMPPA APEIQRTGET TRAALAISEA STQSQSVPES KPAPTESTPE AGGSGTVTAS 720
  721 QDQGDEEDGD TSSSEESEQS HDDGPTDSRD AMPSWGGSAQ LFGDSGVGGN RQQQSRPADD 780
  781 KGKGRAVEVE DEDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle