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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39957584, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLYDCEEAK LNLLINVSPV TKGFRTKTAL ALGCNMQKIT GMRADWCIGY QGLFDSMLPL  60
   61 KQGARPPSRV QQVLRSFKVH SGRDQGTPIS SGETPLAPRA QNVLSTANRT TAHRDEIDVA 120
  121 DNAMKRNNRG SSPASASLPK IAVNGPSTNM TAEPDKAGTE GERVQGGGDG IDAGLRSLGH 180
  181 YKRALPPWRY AVRQKMLPLI RWETPYLAWL QSKIRSPALD SYFAITANLG THTFFMIGLP 240
  241 IMFWCGFMEF GKGLVHILAT GVFVTGFIKD LLSLPRPLSP PLHRITMSGS AALEYGFPST 300
  301 HSTNAVSVAV LGILMLHDPT NTLSSSVKLY LEVLSYFYAV SIVFGRLYCG MHGFLDVIIG 360
  361 SLIGIFIALG EFYCGPILDS WLHATGWRGS IVFILTIIVL VRIHPEPADD CPCFDDSVAF 420
  421 AGVMMGLEVG FWHYMHSSFA WPASDRFSLS QLGWPTVGAR LVAGIIVIFA WREIMKPALL 480
  481 KILPYIFRAI EDRGLSLPRR FFVNASEYKN IPDLLRLHTD NVIPSVSDLP EIVRNIRRVG 540
  541 TRGRSVSIGP QSAADAYETL AYRERRRRES MGSNASLGSK PSLRNLREEV SREGGASGDA 600
  601 FEDGDGFAFS SSLSSAQQIR RRNQSPGTLA DYESQMGRGT VVVGDEGGKG EDDVDIFIGQ 660
  661 QDEFEEKEMF EKLIKPRVRY DVEVVTKLVV YAGIAWLSVE GIPVMFEYIG LGAEHLRQPR 720
  721 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle