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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YME2_MAGO7
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAGLWACSN TATNNCTPEV QASSSRPKSD DVAAEVDYGH IVPRANEAAL YFDNIFPLGL  60
   61 SAILWRRWGT DEDFSEQLLK RFEKSSFGFG ITDPISMVKR SIPKSLPIKV TEIIPRLKDG 120
  121 GAFVKFSHGP ETTPAEIEES LAKSLQDRPV KPWFNPFTSV RVNAVKGVPW LEDLYRLPKA 180
  181 RLKVEFCPPK ELSKDSTSTE LSQEALYGLF RRYGKLSEIT PQPSDSKVTP RFAHVDFVRV 240
  241 RDAVMARNCL HGLTISQDNS ATRLRLSYEQ KVKPHKIWEW TTSHPRIVIP ILAALLAAFT 300
  301 VVVFDPIREF FVRAHVQGSF RVSNSRLYRW FKRRTADVTN SVFQRHHDKG EQAGLQALWS 360
  361 QRKDIIDSVQ KWLLETADTF IVVQGPRGSG TKELIIDQAL KGRPNVLVID CKPIVEARGE 420
  421 SGTIRKLAVA VGYRPVFSWA NSLSSMIDLA VQGTTGVKSG FSETLESQIV KILHTTASAL 480
  481 KKVSLEQYQK DGSGAEISED AYLEAHPEKR AVIVIDNFLH KHDDGGLVYD KIAEWAAAMV 540
  541 QSNIAHVVFL TNDSSYSKSL SKSLPDRIFR QVSLGDLSAS VAKKYVLGHL EGLDRDESLK 600
  601 DDSSEVSRDD KGAENPSEDD IEAESKRRRD LAELDGCIDT LGGRLTDLEF LARRLKSGQS 660
  661 PRNAISEIVD QSSSEIIKMF LLAKKSTEST QTQWSAEQAW FLIKEIASKT SLRYNEVLLS 720
  721 PTFASSTTPS AADGEAAIEA LAAAELVTVT SHRGRPQTIR AGRPVYQAAF TQLTQDAVLK 780
  781 ARMNLLLLTE LSKVEAKNID KVETELALLG ALPKQPREVT DRVTYLLGKL HSSQVKISEL 840
  841 DREMAMLKGV LVREV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle