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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145013502, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVRVEEGL VDYRLSVIDA CPLWANNHLL AAARRSDNEA WCAETRRRRR MEYDRESLPG  60
   61 EGASRHDGGG RGLYRLESNP SSTSIFEDVE MAQDELYSGP MAESLPTSLS AFAHRRPRAD 120
  121 STTSFAFYQE DEDDEDPAAA GRPLLGDGTT DIDDLDEIPF HAGIEDEEDS NDLERQAPDN 180
  181 DYVLHRRNST HSRHSVHSRL LRRDSAATEG SSYGTGRVSQ KIYMVSEDLT IVIAGFKTSL 240
  241 VGLAAYTIIC LGTLGIGWLL FRWLPRWHVK LLGQPCPLRE CEWVVIENQW GEMAILDVQS 300
  301 RPYGRSLSTV FGQPGKLSAY ALEEDSDPIL TELRVVDYRY VRFYFQPLRD KFMLCYGWKD 360
  361 PNWTDVHSIR TGIDSEEKSH RDLVFGTNLI DIEQKSMFRL LVDEVFHPFY VFQIASLILW 420
  421 SMDEYYYYAT AIFLMSFGSI TTTLIETRAT MRRLREISRF ECDVRVLRNG FWRYVASGDL 480
  481 VPGDIYEVSD PNLTQFPADS LLLGGDCIVN ESMLTGESVP VSKIPATDES LHDLNLAAAT 540
  541 LSPELARHFL FCGTKIIRAR RPVEGGEGEA VALAMVVRTG FNTTKGSLVR SMLFPKPSGF 600
  601 KFYRDSFRYI SVMACVAMVG FIASFINFVR LELAWHLIIV RALDLITIVV PPALPATLQI 660
  661 GTNFALSRLK KKQIYCISPQ RVNVGGKIDI MCFDKTGTLT EEGLDVLGVR VVSEDTKSFS 720
  721 DTLTNPEILT DLQGDSRDNN SNRKAALFTM ATCHSLRSVD GELVGDPLDL KMFEFTRWSF 780
  781 EESEQGFGGE SAEDEQGNLS PSIAKPPADL KDCLDWHDNS GRPVTFELGV LKSFEFVSQL 840
  841 RRASVIVRTY GQQSGDIYVK GAPECMKDIC RPESFPVDYD ELLSYYTHKG YRVIGCATKH 900
  901 INKLSWVKAQ KMKREQAESD LEFVGFIIFE NKLKPTTAAV LEELVKSNIG AVMVTGDNIL 960
  961 TAISVARESN LIDKTAHCFI PRFIHGNSTD PNSQLQWESI DNNMLQLDEK TLMPLPPPPQ1020
 1021 SDASLPYDIS NIRNYSIAVS GDIFRWVVDY ARPEVLHRML VCGKVFARMS PDEKHELVEK1080
 1081 LQSIDYCAGF CGDGANDCGA LKAADVGISL SEAEASVAAP FTSRVFDIRC VPEVIREGRA1140
 1141 ALVTSFSCFK YMSLYSAIQF TSVSFLYASA SNLGDFQFLF IDLALILPIA IFMSWAGPYP1200
 1201 QLCRKRPTAD LVSRKVLTPL LGQMCICIAI QAVVFIAVRK QSWFIPPKIK HDESNITNSE1260
 1261 NTSLFLISCF EYILAGVVIN AGRPFRQGML KNWPFVATIS ITLLATLYMV LQPARPLTDL1320
 1321 MELTWMALDF KFYIIVMGFV YLIIAYTAEH YAFQRIARLI GRVNQAVTGQ AKKRKEYKMI1380
 1381 QERMRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle