YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145013756, gi...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAMATQQL RLQLPRLSFL SSNSFATTYI RQLSLPLFPS VKFALPAISL GLPSIPSIPA  60
   61 LLGEIWEGIL RAVPKKKTSH MKKRHRQMAG KALKDQTAIC KCPACGGLKR MHYLCPFCTE 120
  121 KIKKALKDSV EDHAEPR

Type	Start	End	Confidence
Cytoplasmic	1	11	0.63
Transmembrane Helix	12	30	0.52
Non-Cytoplasmic	31	46	0.67
Transmembrane Helix	47	66	0.57
Cytoplasmic	67	137	0.60