YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38108523, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRIASRRS CLLLRTNASK SIGLVQRRGA ASSPKLGDGP LMERRADREL PDPRTIGHRW  60
   61 SRSLPIFFIL MAASSLAIFN YQKMSSPVVA STLYALRIHP DAREYLGDNI YFKQQIPWIR 120
  121 GEMNQMHGKI DVWFTVKGNR NSGVMRFTSR RPSSRAMFET TEWSLERDDG SKIDLLIDGD 180
  181 PFKGIQIGES LDNYYDDEDD APQTRGFRK

Type	Start	End	Confidence
Cytoplasmic	1	62	0.85
Transmembrane Helix	63	81	0.85
Non-Cytoplasmic	82	209	0.95