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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39968699, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNPIDPSMT AKNAKTQTLS PVPGLKERRG QAKLGHRGSN SARAELLARS EARSRMRDRF  60
   61 RKILVNTLLE GIINIAVICL IAVACARIED ETGLFSEISS HLSAAMGGGS GNSRFRKIQS 120
  121 FQTDYAPATI TQYESLRSGM QVIVADRKGP KINGYFTLAT EIFDDSGAPH TLEHLVFMGS 180
  181 RSYQYKGLLD KLASRAYSGT NAWTAVDHTA YTLESAGWDG FAQILPVYLE HVIAPTITDE 240
  241 GCLTEVHHVD GEGNDAGVVY SEMQALENTS GELMSLRAKR LLYPENVGFR YETGGMMEAL 300
  301 RVLTPERIRE FHKVMYQPRN LALVIVGETD HENLLQILDE FEESIADVIP SLDTPFQRPW 360
  361 IDSAQPPPIK ETVVETVEFP EEDESTGEVI MAFFGPSCTD IVQSSALNVL LTYLCGSSVS 420
  421 VLENVMVEKE ELASSIGYWW DARPDTVIWF EPTGVATEKL AFVEQRLISL LKEVAGKPLD 480
  481 MKYMKECISR EKRQVKYHAE ASEQFYSNNI INDYLFGKRD GSTLKEMESL DEYDVLDQWT 540
  541 DEQWRQFLRR WFSDANHISI LGKPSMELAD KLKKAEEERI AKRKQELGPE GLKKLAERLE 600
  601 AAKQKNEVPI PESVIDKWPV PGTESIHFIE SKTARSGKAR ALGTPSNSAQ THIDGAKSGK 660
  661 PLFVQFEDVP SNFVHITVHI GTAPAATKLM PLLSLFSDNF FNTPIMRDGK KIDFEDVVME 720
  721 LEKETISYHF SYGSRIGDYE SMILQFQIEP EKYATIVRWI RTMLFDSIFD PQRIKACVAK 780
  781 ALADIPEYKR DGKQMSTEVE MGLHSAKNSL HTSKRTLVKA VYLRRLKKLL EKDPDTVISW 840
  841 FEELRKTLFT FENTRVLVTA DVTKLGNPVA TWDTLTDAFK SHEAKEMIPI VKPETMLNDE 900
  901 GRNPGSIGAV IVPMTTLDSS YGVSTTKGFT SYMDPRLPAF MVAVGYLEAV EGPLWNAVRG 960
  961 NGLAYGVSFS RELDCGLLHY KVYRSPDASK AIEASRAAVE AIATGKAPLE KNLIEGAVSG1020
 1021 IVMGFADEQS TMAAAAQQNY MIGVIRGLDP EWSRQMMAAV RHVTHEEIRS VINDVIMPVF1080
 1081 KPGSSNVVVT CAPLSQESID KALETMGYKT QIQPLSHFHD NYGFEAVDGE DDDVEDSDDS1140
 1141 EGSEEGSDDE DDESGSEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle