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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7490747, gi|1...
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTHIQFPSML RNRLFKTPHQ TGFQWRLGAP ATGITIRNQP IRSYSGLRGN FLIDKRLSPV  60
   61 KFNKYSPSDI VFYNIGSSRL YSTETPTPSK VKEAPKQVAA EETKPTTVVK KPSIWQRVKG 120
  121 GVLHFWDGTI LLGVEIKISS KLVYKMAVGY ELTRRESRQL TRTLKDIGRL VPFSVFVVVP 180
  181 FAELLLPIAV KLFPNLLPST FEDAKDKEAK KAQLRKTRNE VSNMLRSTLK SGKFTFSNET 240
  241 RESKEFRDFF QKVRTSGQSP SREELIEVCK YFKDDITLDN LSRAQLGAMC RYMNLNAFGT 300
  301 DPLLRYNIRH RMRQIRRDHR AIYIEGINSL SIPELFNACN SRGIRTQGLS PAKLKEELSV 360
  361 WLDMRIKHGI PSVILMLPNA FSYGYNEGTY DSRWDALQDT LASIPDELYH ETVVDMPTKQ 420
  421 VSNKERLEIL REQEELIEEE AEHVAEHPDL AKKQTEENKA TSKPAVSAKS PESNIPKNER 480
  481 K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle