YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39972883, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNLQTLPRF LLPRLSWQTP ATASDCTFRP ASLLLRPSKR PHIQERREPQ QQSWAGPKRL  60
   61 FHTHNEGQRA HAIGFQSHRL ARQPTASPKP RIPSSRRAFH ASPPRRKDHH FDTLKLVQRL 120
  121 QSEGFTETQA EAMMKILNDV IEERKVSFTS IQNLTRTMVP REDAAKATYT QKVDFAKLRS 180
  181 ELLSTDNTET NTTRAAHERL TNDIAKLSSR LRDEIGRTQA SVRLDLNLEK GRIREEAVSQ 240
  241 ELKIKETETK IEQEAAALRQ QLEQVKFQTL QWLMGLCTGF AALMLGLWRL LM

Type	Start	End	Confidence
Non-Cytoplasmic	1	268	0.90
Transmembrane Helix	269	291	0.90
Cytoplasmic	292	292	0.93