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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38107001, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVPSAPHIV LLAAHLAAKA DIPALSYLAS LHDQILRKEL LLRIILTYLP ETVRSAEYVE  60
   61 LVAQIGSGQY PSPDDPDRSP VEFDAPHIEE LSDEQAVKKA KRLHLLKLSW EDAPTEIDPE 120
  121 DHLSLFLLRR AYRVDEEAGL LNEVPWLFAP FMDHSPYLRT WFISVLTPLL RRNCEYYLDD 180
  181 PVSQTLAEFE RLPDRVAARL LLSRTGVSKD DQQYASVGRD LRGLVSPWLY NDSRWTSRQH 240
  241 GLIPKGDQEQ LAKPEELCPG WEEVLQWLVT QASGSWKVAV SAIEQWDGPG DADLGGYEGT 300
  301 AWLEEEEQQY MERRYARTAL ASAYLVPEAS VDAIEGVHGI VEKIMSLLDE DPAPPLPTAA 360
  361 SLLSPMPKDL LGSCKDGIMA PKNAEHLRGD LLDEANPLTK PASAPVQLLY ATCLSAYILT 420
  421 RAGSPCTIKR AAELCLMQNE RDQKAEATKL IHAICGGNAP KSDDKYWIRA RNEMLWLRDW 480
  481 GAEEYGTPSS VDGCGVFGRV DREFLEIEIL KGLLNNTRYS LARSLYEDSP DAPISNKPLQ 540
  541 DTIFAAAMNA YDNASNPNRT RGGLKKCNDM YVHLPQYQSI NTQKKINLTS NSINAFPKTI 600
  601 EKSTPAAQRL EALLKATHSL SDYRLVLKQG EPFTPVVMRV HPDSISIVAK VLEQNPKSYT 660
  661 NIQGLIDLGN HMVEAGLTVR DQHGHSVLTP ELKPIERSMA EKRITAMCVD AALAEDDFET 720
  721 AYSYVVNRLA SIAAPAAGKD AIVDEWSWKA ALQAGKYRRT AKTLRPTHLG NTSSNPEIRH 780
  781 LEQRIECLST ALRIAPAATL QEILNTFRRC EEELDVAVRA EADSENAWDD KGDMTAMPGG 840
  841 YSATATANTT TRSQPTSFSS AARSNQTEES PLSLFDLSRA TARAASKNFS ALSSLKRSGQ 900
  901 QAARSPTDHN GSSLASSMGS LHDGTGDSAD HPRARKRDQL REAALGSLVS GVGWLVGAPP 960
  961 VDRGQGSDKG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle