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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39972413, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTPDVASLV ALGWKSAARG ELRSIHGDRS RNFTADLSSI ATSRRRIDST SLSQLLQGDS  60
   61 QHLSWRQDTA LPGVGDQLKG QLTPKCFASS SAIDDNKPGP SRCFPFWQEL LACYVVNTSG 120
  121 DDDSGKKKCA PALEDYYECL HHKKERARVE ALQLAYRRAE HASPREDPPT AGQIRNLGLI 180
  181 GKEEDTKKFT ALQASIVSSQ LHDSTSYRLS FLTNLGGFYA AFQMPSFRGI KISLVTVTDS 240
  241 TSACLPEFPH PDGPSAKLDQ QHAGPDDKRR ARSASRSCAP KSNPRISVYV PSQPNTKFFF 300
  301 DYRVIKIPPS TPDAPETKYL FFKVFINGRH IVAWGIDLRK VTSGSAYRAL YGPGRHYQHF 360
  361 SEDGKTVMTQ PGIEARYFWF LSDVGSLGQN SGIKSVADDG GLIEVQVFRA KGRTGRTPVL 420
  421 DPYRSQDRYG VGVLSDGLVD RPEEAAYYDY HLYDPKDAPF ATFDFHYRSW QNLRQLHIIP 480
  481 HDGLQAFAST SDDKFGPSDL GSTKPVWEEL EEFGGGVHKD RQETHTQHSR SSSAPRASTY 540
  541 KLINEDSGIF DYPHSRGSAA SAVRRRNSFG ARNYQLNRPP QLEPPTTASF SDRIPQPSKA 600
  601 LRDSAAYDFL LRRPLPELPP TDLADDLDPR TSRGSIVTSR RSSVSSRAPS ITPSLLPYID 660
  661 GESFVSESFE LGVAKGVELS QKKEKEDKLW RRWSRKTTAM ALPAEWLSSR STTLPSTGQM 720
  721 AFDGSKAQET GKLCKTSDVS GSDYDATSIA SSTSFYEYDR KRSFDSTAAP RETEHLVLGE 780
  781 KGQPHIALTP MQEERRRRDV DTAGAGKVSP KAKQLLGDEL DFSSNFALSS SKQRANPSIQ 840
  841 SFGTLSVSEL EWAGGSPLTP ESLKRQRQPS TNFLAKLWSP RAKNRSTSSK SSPFERPSGN 900
  901 AEGSLKGLKK KGFGASGSSL VVGLGGHLGP SNTWI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle