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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38106975, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQFRRAPVG NNSILGALQA TSLSDTKASL PAASILDYLP VSDLMRFACV SRRMQEMVYD  60
   61 DTRWVARLKS MGCWDEAEAR RRWDEAVARR QAAGERERRA PQVTIFDATA AGSGGYGGGG 120
  121 RGGGPGGGGR GLADVSRGFE RMSVGGMPAL VPQQPGQAQR TADLASPTAA ADDSPMQDSN 180
  181 AVLEVLSKVK SVRGRARQEY ARIYGALGPF YYDLVRARSH NDPVLFRVFR DPERQARMLS 240
  241 NLLTFSRSDW AEGAREREEK VTGMMGIFET AVLREFEQGY ELWDVDGRMK RYAHVLDALN 300
  301 GGNAAVELFI AKHPLFTDRD VLADSAECLT KVDGVEGISL EPSRQFFELL AGKLNEQGAL 360
  361 MAKIFPKPST VFWTFVDKIK DDVIMEYCTP LFDESHERSL ASYLQAVSGV FEQAYLFYSS 420
  421 LQVPNGTKEE SEEKAKEMAL RTFEPHLDLY LQEELDFFIK NSENEVQAFE TRLSELDASA 480
  481 ESFYMSNFNR QADKKDFLSS FKKVVMMPVT VLPSLPGQLL TAPFGGGSKS SAATPSSNGD 540
  541 TLQPTSSSQP HRPQSPGMAG AFERRGSPLP EQGEAPTDEL AAKAALMASR LEGIKSLFSI 600
  601 EVALSLVHAA KTSLGRAAVF IRLGGQVGGE AREQCEAIFV NLLRILGQRH IKPGFDKAVG 660
  661 HLAHYNPRDV TDHEKGGVAP LVMFIELVNL GDLISQMIDV FYEQQLAAPK IADRNDFLDA 720
  721 SGLAKKKFEQ MLDESVAAGL NKGIDVLMDE VEYICATTQQ PTDYNPTPGG AAAGGEKNSG 780
  781 GSGNTAGDLD IGPTETAKRV VELVSSHTRM LVGTTEKSML DVFNGEVGLR LFQAVCKHLK 840
  841 RQRVSTDGAI KVISDMNLYF EYVRSLKNAD LLPYFKALRE LSQIYLIDPR HSKEMATIIA 900
  901 DGDRFGGVFR AEEVYKFAER RADWYQVKRD VEKAMYGLEC SLM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle