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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38106953, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLDHLWKT LILLVAAIIT ILRSTLTNRG RRNAQKQDPD SPNAMMVDPI DNATHVVDVN  60
   61 GPLERDSVTE ITPDTLADDA EPTSPMPLAT DFEAIKELVM TPLQEEPKVL EDAYNTWTVE 120
  121 NWRSLSKKEH GPIFQAGGFP WRILLFPHGN NTSNVAIYLE HGFEPDKIPE DWSCCVQFAL 180
  181 VLWNPNDPSI YAHHTAHHRF TKDEGDWGFT RFQELSKLFN VPYDDATRPL IEDETANITA 240
  241 YVRILEDETG VMWHSFANYD SKKETGYVGL KNQGATCYLN SLLQSLYFTN AFRKAIYQIP 300
  301 TEQEESINNS AYTLQRLFYQ LQTSSNAVGT AELTKSFGWE TRHIFEQQDV QELSRKLMER 360
  361 MEEKMKGTDA ENLLPELFSG KIKTYISCIH VKYESSRIED FWDVQLNVSK MGNLLNSFQD 420
  421 YVSVEKMEGE NKYFAGDEYK LQEANKGVIF MGFPDVLHLQ LKRFEYDFTK DAMAKVNDRY 480
  481 EFPEVFDAAP YLSEDADRSE PWIYQLHGVL VHSGDLNAGH YYAFLKPDKD GWFYKYDDDK 540
  541 VTKATKREVL EDNFGGPFQY SNGIRPQGQK KVAMRPNSAY MLVYFRQSRL DKILTPVTHE 600
  601 DIPRHIETGY LEEASAREAK RKEREEQHLY RWIKAVTPSS YQAHNGFDLT NFDAVSSQTT 660
  661 DPSPGAPKLY KVLRTATMEQ VTEIIAKDLG QDPARVRLWL MVGRQNKTVR PDQPIMDLRP 720
  721 TLDETYSRLA TQREDSLRLW VEFAEEMGEN GEAAWPTYQG PSPTGVIFKN DLILLFIKCF 780
  781 DAEAQTLTGL GHVYISREKK VDDLIPHILK KMGLEKLPSD EKILLWEEIK PGMIESLKGK 840
  841 QSLKAAELQD GDIVCVQRKK DAGSQNFLEK RLSSDTRSTD DTSRKTENFE DAKEYYEFLV 900
  901 NRKTVKFNAH PTKCDPNEYP PFEMVLNSKM TYDQLAEKLG ERLGVPETHL RFWTLHGTTG 960
  961 LPRTAVKRGP QQTLNTILNP AGFSQLNSAQ RNDALYFEIL DMSLAELDTK KNVKITWLSE1020
 1021 GIVKEEHYDL LVTKSGVVED IIESLVKKAK LKSEEEGGEI RLYEVNGHKF TRELPREYPV1080
 1081 ISLNDYLTLV AERVPEEEVD AKDQGQFVYA FHFQNEPNRM HGMPFKFLLK AGEPFSETKK1140
 1141 RLEKRTAIRG KNFEKIKFAI VRRSSYSRPQ YINDDDVLWD ILQPEDEYLG LDHADRSRSL1200
 1201 RNGVGDLFLR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle