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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38106851, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQNGSSVPG AQPPSKASAA EPKLNNEMEM GSIPGGKPAE NDIMQLARIG DIPAMEKLFE  60
   61 MGEFDATYSD DEGITPLHWA AINNQYAMCK FLIEKGAPIN KKGGDSVATP LQWAAQRCHY 120
  121 YTVHLLLQHG ADPLATDAQG YNTLHISTFN GNVLLLVLLL HQGIPVDVAD SYGHTGLMWS 180
  181 AYKGFPACVD VFLRWGASVH ARDEQGFTAL HWALVKGSPG CVQKIVEYGA DRFAKTETGK 240
  241 TPAITAQELN TTVAWRRALR ECGYDEDGNA ITPQWPGASY LLKDKKGFVN KFLFLWPFLL 300
  301 VWMMFHILAA MPIYFAIIVG AVVVFAVQWV AQNVLQHAPS EMRSFQRTPW LAGIFAASLF 360
  361 WTSWNWLFTL MPSTTLYAAP DQTMYFLNFM FLVFASLTAF FYTSCMMDDP GFVPKMNGIA 420
  421 EQKAVIDELI GLWKFDEANF CVTCMIRTPL RSKHCRRCQR CVAKHDHHCP WVYNCIGNNN 480
  481 HRQFFLYLIT MSFAIITFDF ILYQYLTTVS KNASDQCNIL APSLCKVINA DAFTLIVGIW 540
  541 ATLQLTWVSM LMFVQFLQVS RAMTTYENMF GIDHRSSGVA ALNSAFTSTG APLDPTTGVP 600
  601 PTGSTGAPAT AESGHAHSHK HKHGGCLKQW GRMLGVDAFI ETATGRGAAA GGDNKKKRRK 660
  661 NPYSRGCATN CRDFWCDPAP VFGRRETGAG MLGGQVVNWT QVYESPAGMQ STVGGRRRGG 720
  721 YEAVAGEEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle