YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39975783, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKPTDLPKM EYRFLGRSGL KVSAISLGGW LTYGGHVDED ATFACMKAAY DSGVNFFDCA  60
   61 EGYAGGESEI VMGKAIKKYG WKRNDLVIST KIYWGAANGD NPVNNVALSR KHIIEGTESS 120
  121 LERLQLAYVD MLYAHRPDRQ TPMEETVRAF NYLINSGKAM YWGTSEWSAD EIMNAHRVAD 180
  181 RLGLIAPVME QPCYNMIDRL KVEQEYAHLY REVQLGLTVF SPLKQGILSG KYKDGIPDDS 240
  241 RFAQQQVEFI KGYWKRTGKE QWDGTVQKVN KLAPIAERLG TTQAALALAW VLKNPNVSSA 300
  301 ITGASSAEQV FSNIKALDVV ERLTPDIMKE IDDILENKPP AMTMRIEHSS QRNPMAPSSV 360
  361 TVTAAAKSKS KSKTSSSKSV PPPPPSVPTA KEREAIEAEH KDFFWTYTEE PHRTRRLAII 420
  421 KAHPEVTKLC GPEPLTKYVV AGVVALQVFL AWMLRNTSFF SIKFWAVAYI FGATANQNLF 480
  481 LAIHEISHNL AFRSPTANRL LAIIANLPIG IPYSASFRPY HLTHHKSLGV DGLDTDLPTA 540
  541 FEAVFLDSIL GKAFFCTFQI LFYALRPMFI FRVPFTWVSL VNVLVQFTFD YFLVTRIGSG 600
  601 QSLLYLILSS FLAGSLHPLA GHFIAEHYVY ETVAPEARDP KNNVPVPETF SYYGPLNFLT 660
  661 YNVGLHNEHH DFPAVPWTRL HKLNEIASEF YNDLPRHESW VYAIWRFIWD EQVGMRCRVK 720
  721 RKDGGRLVGS SGKKAAVADW KQEELES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle