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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NTE1_MAGGR
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSTAALAT ASAKLDAVAQ QGSSSWIGFF ANIILGIISL VYSILYSVLK LTTFSIPSLL  60
   61 YTLFSTSLTV TMNATTLMLI IVLVFSLVSW FVRYRYLNMY SRLPPEPQRK EPDVDLFPDT 120
  121 HPGGSKPGLS NYLDEFLSAI KIFGYLERPV FHELTRSMQT RKLIAGETFN LEEEKGFCMV 180
  181 VDGLVEIFVK SARTGQHPVG ESCSIDSDGS DEHEEYQAGN QRYQLLTEVH NGAPMSSLFS 240
  241 IMSLFTEDIK LRHGGDEGGE PTSATETYTS SRYGLGNDFS DQRESTVSVP TTPQLERSSS 300
  301 HGPTLHDGDA NPSMGGRVPA SIPPMSLDPP LQSRPKRPTT SRHATTSVHP DIIARATVDT 360
  361 TIAIIPASAF RRLIQIYPKY TAHIVHVILS RFQRVTLATA YNYLGLTSEV LHIEKSMIDN 420
  421 ATCQLPNFLR GDALTRLKEK FNHERERIGE KDCTKGIALH NSSTGRRRKS TASLRKEAAL 480
  481 QAITHGQRPS SVTASPPLQP RESGNKHTSN SGDLLMNIQL SRNGGRRSTS NMDPLTRQST 540
  541 LLGSLETEVV SPLSQRTSNP FETRRHAHIS LNKRETRDED GLFRESILEC MFKAIGLTAN 600
  601 GTGAREPDSA DASPRLTSYD QIRRGGYSSH NAFGFIDPYG GSVDGDADSI TSGGTGPGLP 660
  661 VNPHALAHDM RDEVEIVFFP SGSVLVEQGE RNPGLYYVVD GFLDVCMSAA DESSGDILKA 720
  721 SKNESSLNIG PGNQQGSAGR DRFMDANLGQ SSSRKRASNV RRNVALIKPG GLAGYVGSIS 780
  781 SHRSFIDVVA KTDVYVGFLP RQSLERIVDR YPIVLLTMAK RLTNLLPKLI LHIDFALEWL 840
  841 QVNAGEVIFH GGEESEAIYI VLNGRLRLVE DRQEGGVDVR GEFGQGESIG ELEVLTESAR 900
  901 SGTLHAIRNT ELVKFPRTLF NSLAQEHPNI TIKISKIIAS RMRKVVDDPS TFVGKEGALK 960
  961 ASLNKSSSTL NLRTVAILPV TSGVPVVEFG NRLMGALTQV GTPNGATSLS QSAILNHLGR1020
 1021 HAFNKMGKLK LSQYLADLEE KYGLVMYVAD TNVNSPWTQT CITQADCILL VGLAEGSPEI1080
 1081 GEYERFMLGM KSTARKVLVL LHADRYAEPG LTRSWLRNRM WINGGHHHVQ MAFRTQSVPI1140
 1141 NPTAKRTGPS LKERVQILQA EIQKYTSRKV RHSPFYSPDA PFKGDFHRLA RRLCGKSVGL1200
 1201 VLGGGGARGL AHIGIIRAME ESGIPIDIVG GTSIGSFVGA LYARHADVVP IFGLSKKFAG1260
 1261 RMASVWRFAL DLTYPSASYT TGHEFNRGIF KTFGKAQIED FWLEFYCNTT NISKSRQEIH1320
 1321 TSGYAWRYVR ASMSLAGLLP PLCDEGSMLL DGGYIDNLTV SHMKSLGVDI IFAVDVGSLD1380
 1381 DDVPQAYGDT LSGLWAFVNR WNPLSSTPNP PTLAEIQARL AYVSSVDALE RAKMTPGCVY1440
 1441 MRPPIDEYGT LEFGRFDEIV QVGYKYGLEF LQKLRDEGAL PVVEETEAKK ALRRTMAPRR1500
 1501 ASI

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