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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145011566, gi...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFVEDRVRL LDSQIDRICL SPLLTQDGFL DGENGADDES YEKTFNVEGF SSAEITEKLW  60
   61 IVKALSSSSS SQALLGSERI QSLLVQSGLV DSYGQPDALD AKSAQQTEIE WLLISKATLQ 120
  121 VYGLLFNTLL DQIIPLSNDI WYWDSVLSSY TYSSLFTVQT APLRFWVWAK EIAVDTQVRL 180
  181 RRLQASPLGV LATEGPQASL SQRWARFYGI VRESIVTRSL ANVQRRVMSP IALCRTHAKQ 240
  241 RQAQLKKLRD MTASGLGVLI DEALSFGADE DLKTASNDAN IEWKGFVERS VALMDLIVRE 300
  301 VLTLETGVSD FEHRVFRGVE DDPELSIHAE DVAGAQKPAI LAQRLMSILQ SSLPNHVAAT 360
  361 NELVKEHGRP PRLVRYWLPA TVLLLSSSTI LKVLVNRQED VLQWIADLGA TMRDFWFNWV 420
  421 IEPTRKVVGT IRHDSNSEIA IMSRDSLRAD RDSLERMVVE FALERPELAG ATSALNESQV 480
  481 SDLRAKIREG DVTPVLKAYE SELKRPFVGA IRGDLLRSLL IQVQKTKVDL ETAISGIDAL 540
  541 LKSQELVFGF VGLTPGILVT YFGFQYLRTL LSGRKGTRRG ERAVRAVRVL RNIDRIFSDA 600
  601 MSSPSQDNLL PYKDYGLLVC EVHVLRKLVN GVLPADVERE FLEDLEDVVN VKGITAQMRA 660
  661 FDRIRWAYRR WL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle