YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38106641, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFFLLPVST RRTLLYCQRA PAIPKKQTIS ERVQSKAART WADWEKKPGG WQKLVVGYGN  60
   61 QALRRIPYEE WGLKSVPPLS TARKEDEQAG KVKVEVVYPK SLVKAERVTS ILHTLSTGRE 120
  121 SLHKKRLVLC FLGMPLTIPV AIIPIAWSHW RALAGGRHIQ FLLQNKLITP VSSPVLDQVY 180
  181 ADQDHPLPST AEPTTTKTSA NLPESPIIIE HPSPEEAPNY PGGETLLLSQ ENAQRITRLL 240
  241 GLPQLEVEIE RAIWQVETAI AAQNSEKDGK ASEPHP

Type	Start	End	Confidence
Cytoplasmic	1	126	0.90
Transmembrane Helix	127	150	0.86
Non-Cytoplasmic	151	276	0.94