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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38106230, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSQQPSPAT SSPPLLSPGT SLPSVSPANA QAQPSRTNIA ASPSVATAAS AAAVTVAGSS  60
   61 GHRSSRLRGL SYLKNYTQNH LLNRDLNKES NSNPASPGSP DSPPPQSSTF NPQTIPAQIK 120
  121 ASRPVSRLLR SVSYSPTSSP APTTAAIGIL SAASPASVST SPVTTPPPIS PTSRHNRFSL 180
  181 GPASASLFLS PETFDNTFDT AHRSPSPFLS TASPVNSPQF EFASSSSASV RPEPQTEALA 240
  241 TDPLSTKTSA LPRLRPSSLA PPHTNCPGTD VEPAALDLDD VNTAAGTMTR MRAATASDAA 300
  301 VLAQNGGAST DAMPSIRFTT FCDPRATRPS LTFTPVSRTL PTGTEIIRVG RYSERDVPPN 360
  361 VPINVPSAAP VGFKSKVVSR RHCEFWNEDG KWYIKDVKSS SGTFLNHIRL SPPGTESKPF 420
  421 PVNDGDIVQL GIDFKGGEEM IFRCVKMRLE LNRGWQNKLN AFNMTTHKRL RNMTKSDPNG 480
  481 ASQTSQDCSI CLNSIAKSPF MVLAPVIPNF SICPNCRAAA DLEAEVEDPE EWEQLDSEEE 540
  541 EATDAANAPA STQPKNDSLA AASQAGDPLQ GQSQLSNAQG TQAEVVSQPN GTASQTTPGR 600
  601 SATPSHATSM PMPIPRASSD VTRRPVPSST MEMDVDTPST PRDLRQTRTP SPASNGPAPL 660
  661 GVAEGPITPR NDAGPWVFDG GVISRLGAST TLASPAVVEG SITPHNAGGA QVTSIDDIAR 720
  721 A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle