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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39940058, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.21
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWEHLSITK PHLVYIILGG FTSLFMLCSS VIKERMYIGE ATVATLCGLI FGPHAANLIN  60
   61 PQSWGNVDIV TIEFSRIVLV VQCFAVGVEL PKFYMERHWK SVIFLLVPVM TAGWLITSLV 120
  121 IWWMINPLSW LESLVIAACV TATDPVLASS VVGKGKFAKR VPKHLRDLLS AESGCNDGMA 180
  181 FPFVYLALYL IQDHMDAKEV TFHWFVFTIL YECVFGAVYG FMIGYLARHG IKYAEKHDLI 240
  241 DRESFLVFYF VLALFCAGSG SILGIDDLLV GFAAGVGFSN DGWFGQKTEE AHVSNVIDLL 300
  301 LNLTYFVYFG TIIPWEMFNN AELGLDAWRL VVIAIFILLF RRIPIMMALK PLIPDIKTWR 360
  361 EALFAGHFGP IGVGAIFVAI LARAELESET PVPLSELPPA DSPHFTLITL VWPIVAFLVV 420
  421 TSIIVHGSSV AVFTLGKHIN TLTLTMSYTT APEDGPSWMN RLPRITSQSR SQARTMSDTE 480
  481 SDEPKMPEYP PGTLPPIGFP GNFLRRVRDD EKDDSVRQSR RASSTGRKRR SSRKRWDDGI 540
  541 GPGGPISESA IFPRRTESDT ANAPETHGNS KALPSDNNSS DQTQVGGQSG GQSENDSQKT 600
  601 ETRPGSGHGG QENDRSRQES ALRLYSEGDH LIIENRDGDV IALDPQTEES GPQSPAGGDG 660
  661 QEGASGWSYD AIKKRLGDWR DEEIQKRSRG QEKTKKHAPA RAYQFGNTII VEDEDGEVLK 720
  721 KYELPSGKPE REGGDLVSQS LKKMGIVSKQ KGGNVEKTND NAPSQAAGAP ASSNPRPIQR 780
  781 SRKKSSAAEE ADEEDDRNIR FKIGGVGQRM TKEDFIREMR KLDKSTRSEV VDQSSASVAV 840
  841 KALANQERRP EDSPKADGNP GDFGRNRAVS QPSKPAQAEA ASRSGDQDGE TAAERRRRLS 900
  901 VLKNMESDDL INENTETPAE RRRREAALGI GPSDQIAEAD SDDEDGLPRE PSPRRGIRFA 960
  961 EPTRGNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle