YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39940060, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQLTEVVDE EFLKTQPGHD EEDDDFTDTD SDYDVSGETL SDRIYALRDI VPPTTRGWIH  60
   61 GKWMGATNIF RTTAAFLGRS AWHISVSAML FGIPFALLWS EEQGMIAMEQ EQRMREQGGE 120
  121 LLTAGAAGGA PGGGDINSLD QLESALGGGV GSVSAKPSL

Type	Start	End	Confidence
Cytoplasmic	1	79	0.76
Transmembrane Helix	80	99	0.87
Non-Cytoplasmic	100	159	0.78