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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39940210, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSTSNPQLG RQLWAAIRDS IDISSVWIRF PVRTQAARSR FHHRPEEALR SLQQSPFSSA  60
   61 KRSFHTSNTS RQRTTSTIYT KHSPAHIKRN CTSGSLLLLG LETPTSPSTQ TTVTTCAGAA 120
  121 ADSVLLASGG SSKPSISALA RQAWRRNVHT GRGGQQTPRN DQPKTSNDDV KSSTGKDGVS 180
  181 ATGSRDGPSS VKSSDQANAR PDLKSEANPA PHEETLTESM SKYLHMPKMP HRPTKEELLA 240
  241 AANGFFQRLK VRFKWLSIRS MRPYNADEWG AFVSWFMLGH LVWILVGTTT FFSLIILFVN 300
  301 TVFAQETLAK WIGDYLTQSA GVTVVFESAI VPKWKDGVIT FRNVFISRRP GQSKSSVKKG 360
  361 SSTSAAAVAA ARQTQPSEED DGNYTQFDVT INTVNVTLSF YKWWNGTGLL KDVEVKGVRG 420
  421 VLDRTSVRWS DGPHDPFSYR HVHQPGDFEI EHFKLEDLLL TVHQPGGFRP FPVSIYSCEL 480
  481 PQLRKQWLYY DFLNANHCSG SFDGSLFTIH PRQIHGVPAG EVGASADHLG EAGAWKKFSR 540
  541 IRIDGLKIDH LNRGVEGPFG WIYEGNVDMV ADLMFPADED DSLGKVMSDF YDKMEDAVTK 600
  601 NRYLRILDKN HRGELGERLS ERFSRPATVP MVVLDESKGH VSDYTTADAD FGPSSPSSRT 660
  661 EEPRTPEAVD EEEPPRYLVM DLRIHLNDVR AAVPLFTHDI SYISQPLVRP IVAYINAKRT 720
  721 YIPVTCRIVK RTSDFNGSWT LYDSGLMDDM SAEVYDAFAR NVEDQHSRVR RLKKVGFWTL 780
  781 SMVVHALLAG VAGDLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle