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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145010773, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSPKTPAA TGGKTPQTHP TAASKTSPPA TQDYKAIAAQ FAAAKKLKEA EDAKAKARAE  60
   61 APTPEQIEAK SRLNALQKEQ AKLRDALEGR RRARFESRWT WTVWFWVWVL FIHAAGILVF 120
  121 TSGFLLSRLV LEEKSTCAEP PTAVLPNGNL LGIKDWKGRG TPDGGCWHPK TFSKAVVVLI 180
  181 DALRYDFVVP VDDQAEYHNA FPFMHRMAVE KPNNAFLRPF IADPPTATLQ RLKGLTTGTL 240
  241 PTFIDLGSNF GGTAIEEDNL LMQLRDVGRK IVHLGDDTWT TLFPGYFEPN ISRAYDSFNV 300
  301 WDLHTVDAGV LEHIFPLMKP ERKGEWDLVI GHLLGVDHAG HRYGPSHTAM TAKLQQMDSF 360
  361 IQNLTATIDD DTLLVVMGDH GMDSKGDHGG ESDDEVEAAL WMYSSRPVFG RTNPEYSAPP 420
  421 ATAKERPVNQ IDLVPTLALL LGIPIPYNNL GQPIEEAFAG KKGDAFGSLA AASRVAAAGL 480
  481 RRYQSSYFAA RGIAQASGPG TPAEVWSSAE AAIATAGAKK DKLQHAYSLF AQYQAETLAI 540
  541 CKGLWARFDI PSMILGILNM ALGLMALLLY IARDSDDTAG SPAVENDDLD TAERKLELEA 600
  601 IVNREKDQSV RHLLERKLVQ SALVGSLPGA ALGVAAQTLM NLGSWKTTIG ITALTSIIAV 660
  661 LAALVGVGRK SFTALLPSSV WSWLSVVIVV SQSAGFASNS YTIWEDSITL FFLSTFGTLA 720
  721 AVSAFRLPGL AERTLGVYHG VLFVLLTRLA SFSKLCREEQ MPYCRSTYYA SATSSTSAPW 780
  781 QLFIPLMVLA VLPTVIKAYM TPTKSYEGLA PTWIGLVLRI TLFLSCFYWA LDAVDNSGWP 840
  841 TISAKLPEGL LKSLSVYIAQ LTLAIAVIAG STAFVWAPPS VSILTAADPA NPGRAQITVL 900
  901 GYGNAHGARY LILPLNILSA LIIITKPVGQ GALAIMMWQM LSLAEIIDLN NITPATSPIG 960
  961 PAILALLASF HFFKTGHQGA LSSIQWDAAF VPLFSIRYPW SPLLVALNTF ASHFLAAAGL1020
 1021 PLLLLWKVNP KRKGLLGLVS ARVLAVFVVY FAVQSLATMA WAAHLRRHLM LYRVFSPRFM1080
 1081 MAAAVLLLVD LAVIFVSLFG FRSNTLAISE VFGWAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle