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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38105752, gi|...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRGPSVLV TDARDRPSAR GSASRGAPAR AGQGGAGRDK MPMRFVSVDN VLQYASEIPS  60
   61 GQPRVPPPGQ QGAHLHHARP GGGPSTRRNS HGGLPTLASI RTGLQNVPSR TTKISEKLVL 120
  121 LPEMEKGDED EDEEDADGES LPPPVLRQDS SEDRPLRDEE LDVLRKRGGI RGKSFAERLP 180
  181 KVQRGDRVSR LTAYCTAQAV KMKPTADFLR TKLGAKTKLY DDCLYTVFHL PLLPGTDGYR 240
  241 VRSRPVLKTP GTGKTVLDIE IERSERRDEH MGYFYEYPTT EEGIDVSAPV NGSHDMAMNG 300
  301 PSPVDRLVAE AKSFAEMFVF SYGVVVFWNF TENQEKDILA DMTFSENEEG LSLQTRPLDQ 360
  361 EDYETEEFHF DYSADVKRPR VFNDMITLLP RSDHMVKLTI SHAIAQSTKL CYFEEKMGET 420
  421 MLDAQHVPKQ LALTGELAMT RTEIVKILGR LFKSRVDINL SSNILDVPNF FWDSEPTLHP 480
  481 LYVAIRDYLE IDQRIKVLNE RCRVFLDLAE ILSDSVADAK MSSITWIIII LIVVSILVTV 540
  541 TEVTLRFGIL EKERGKKGVG DEGGQPELKS DLLSRLRDAN ISLDELRIWG QGLSEPEKGA 600
  601 VCGSTYVGRT FAGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle