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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38105550, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATALRRRPV VHEESPSPTP TPTDTPRTAS PAREEKEKIH VVHHKPRTRK RRNTFIFLLG  60
   61 SLSGIIAAGF AKTNDLIDFP EIGDLGMSMD SLLDVLPAGL VKDMSDLVRG ERDFVDSSSE 120
  121 PFSVGVKAKT EGLQAHFPVV MVPGVISTGL ESWGTANSSR PYFRKRLWGS WTMMRALVLD 180
  181 KEAWKRHVML DKVTGLDPPG IKLRAAQGFD ATDFFITGYW IWNKILENLA ALGYDTNTAF 240
  241 TAAYDWRLSY PNLEVRDQYF TRLKMAIETA TITSGRKAVL VSHSMGSQVL FYFFHWVASQ 300
  301 KGGKGGDDWV DRHVDSWINI SGCMLGAVKD LTAVLSGEMR DTAQLNAFAV YGLEKFLSKE 360
  361 ERAQMFRHMP GISSMLPLGG EAVWGNTTWA PDDLPGQQKS YGPVLNFRKG YGYNKTAPTR 420
  421 NMTVSTAMQY LFDTSEDWYQ NNVKRSYSHG VAHTKAEVDA NEDDPTKWIN PLETRLPLAP 480
  481 NLKIYCFYGV GKPTERAYYY RTPEFPALTN LSITIDTGLT RGEIDHGVVL GEGDGTVNLI 540
  541 SSGYMCNHGW KYKRYNPAGS KVTVVEMPHE PDRFNPRGGP NTADHVDILG RQTLNELILQ 600
  601 VAAGKGESIQ NHLVSNIMKY AAKVKVYDDY PQQGPQPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle