YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38105262, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METRKKRKIG NPSASASPGA PVMSAFALRQ QLLKSQNPPS SSPSETKGAA ATKVSNIKDA  60
   61 ANPEAVLVES ESAPETPASL VPSPATFRAS PETEKVDEPE SSTRVVFFSS FKASKQNFQK 120
  121 KPNGISVLRL SEGERLVILG SYGLTVKNGL ISIAGATLKA RSGATWIHSP HCHALPVIRC 180
  181 SEDATLELRS HPAASSLRDL ARLSPKFEKL WNDAAAEESL KPKGSTWPSY TIVVRQLYTN 240
  241 EDGPKAAPLQ ELASLAEWNK KLASLAAASR KSESMTILVC GPKSSGKSTF GRLLANRLVT 300
  301 ETKRRNDQPQ PGVAILDIDP GQPEFGAPGI LSLVYVESPN LQPPFCHPCL STTGRSRILR 360
  361 SHSIAAISPI TNPDHYTECV LDLYATYATK LRQKCPLVIN TCGWVQGTGL NIITELIDRI 420
  421 RPTEVVYMSQ EGPEETVEAL REACLSKMPL VLMPSQSSKY TARTAADLRI MQMMSYFHVD 480
  481 QPASDPEYLQ WNTNPLASIT PWAVKYGAQD RAILGIMCYD YEPTPDMLAL LIDGMILAMV 540
  541 EVEDMAAFRD MSATAGQHHG HEMDVDSNPN DDSARAYNNV PVICTPQGLP FIQNHRGVTL 600
  601 DPRHSRTVGL ALVRGIDEKS QTLQLITPVS QERITELNTG KNRVVLVWGR LDAAPTWSYV 660
  661 EERHKQEVQT RTKQSTADDV ALEESGPGRP GSTGDNLPWV EELQANQKRA AGHKALRVRR 720
  721 DLGRAKGTD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle