YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145009364, gi...
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSADIFLGL LAILFPPLPV WVKRGLCSAD SLINILLCIL GYLPGLIHSW YIIARFPEEQ  60
   61 YEYERGYNRD AERVTYVFVA ANGENQNSRG PARQPRPSAN KSGAGPTYGT TNNATNNQAS 120
  121 NSRPPQQTNA GEGGSDGAAP PSYAQVVAGD NKIQTQD

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.37
Transmembrane Helix	6	22	0.44
Cytoplasmic	23	31	0.43
Transmembrane Helix	32	52	0.64
Non-Cytoplasmic	53	157	0.84