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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39949342, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKEKATGRT WNTIPPELRL EIYKKLWVPR TVTIYRSAHH DVNTSFEHQV LSLARSQDRD  60
   61 RFEQDVAIDA LSVAAHCPAI QVPREDPVPD ANNDPLTAGN GFLCGPHGHW DANWLRLVRD 120
  121 SMPPDADASG SAPNGPSRQL LPPPLYTTTT SARVDRSTLV PITLWIDRES RAETLKHYRP 180
  181 AFALRGGATR VYFNFALDTL RIPVHGKLWR LVQRRDLQDL VRLRMVGTAD DPSGSRSRSL 240
  241 NPTAATTHNP AEPPAAMGSL LRALCPRLRH VTVEPAWGCA RNNLAWRRHE MDDNLVIFNW 300
  301 REIGELQVGC SSCTWNHGHR PCGVLLRRLR ELKWMVDMPL IMPGSNGPSE PGLVLTFHSS 360
  361 RPIDDFVNGG DDGYGVPGYV RSDETNPGLD EARVKSTLFL DGQHPRASVE EDFHRLCTIN 420
  421 AMQHNIRLAC DLTTHPAGGT SGKETCIRVC HQANSFLEGG LAIGKQTHVL LHSPLFISER 480
  481 MPWRALLELC QEEESRPSLT ETRLLNFGGV SQCRAGEIFK NVKIWRCQAL GLLGTSYIVL 540
  541 GSYSGAEMNP LFWDVGVSGQ AAGSGPSIHF EPHQQSYSHQ QITGAMGGGT SIWASPDWKK 600
  601 DPREIFNYKL WFLVTTVAFA GFSYGFDHGN VGGVLTLPSF RHTFGLDKMS AAASAARQGD 660
  661 IASMMSAGAA VGALSAGPFS DKLGRKWSVF MYGFLFLVGA VMQLVANLDV FQGGRFIGGF 720
  721 AIGGTSVLSP MYLAECAPKT IRGSLTTLYN LAIITALALA FWVNYGVSRW SYPGLESDER 780
  781 QWRTAMSIQI IPGGLLVVMA AFLIDSPRGL ISLGKREKGL ENLCKLRNLP ADHNYVRQEY 840
  841 LEICAQADVG QELNKNRTYL LAARDIVKVP SYRRRFTLSC LLFIFHKLTG TDAINYFAPQ 900
  901 IFAMLGVQQG SMSLMTTGVY GVVKLAASLI YVTVIVDRVG RRLPLMIGAS IQATAMLYIA 960
  961 LYTKFGNPDP NAGPGPGGIV GIIMIYLYAF GWSFGHSVAP YVVAAEIFPS GIRAFCMSFC1020
 1021 LMLNWLFGFG VAKATPVMME SIGWATFLVF AVITYVGVVF VYFCLPELKG RSIESMDDLF1080
 1081 EHRLWEMFRW AYPSEDEKIR KDVQQAMMDE SKGVVEHSER TVGEESDSTG NQQAAPKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle