YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38104650, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWILPLIGYL GTILGFAFLT LAIASGLYYL SELVEEHTVI AKRILQRMIY SIIVIQLLLC  60
   61 LVDKFPFFLS LLGVVSHVVY LGNLRRFPFV RLSDPLFLTS CILVIVNHYL WFRHFADRQH 120
  121 NAYQNMTSYY DTPSGVPTFS EIASYFGICV WLVPFSLFIS LSASDNVLPT MGSETPSIGG 180
  181 GSDEAKRKGQ GIPKALVDNI MALFAEIGAM GGSSLSDRSF

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.65
Transmembrane Helix	7	30	0.91
Cytoplasmic	31	43	0.63
Transmembrane Helix	44	62	0.67
Non-Cytoplasmic	63	64	0.47
Transmembrane Helix	65	84	0.69
Cytoplasmic	85	91	0.58
Transmembrane Helix	92	112	0.87
Non-Cytoplasmic	113	141	0.67
Transmembrane Helix	142	161	0.85
Cytoplasmic	162	220	0.60