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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39948471, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSPIVSLSA SDTVKPIFRL LLVQPRNSKN RGGAMGICRI NPGTSADGQN APQSIGRLTW  60
   61 LASHLKKRRA VNRGLSGRII RQASLDFDNL RRSAFLDSEI PDCHRQLYPR RSRYQTVTLE 120
  121 ASQEMASRAS LRPLLRPDPK RMLGTLSFSA AAGATIRASQ LLPLNPALKP VQSSSTFWGF 180
  181 HRLLQLPHGR NFHSATPLSS HPSSNNGNPP RPSSADTSDS IPIAMPPPEG TGEPAAPIDP 240
  241 PASSPSAEPS EQPSELEQKG TSSETSPHQE QQQQQQQQQS SPAADEPTPS TSPDPSSDAK 300
  301 SPTQPLTARL TNAIDNLQTR LLAGQQTLND LTGYSSIEQI KHQNAELETQ LAAAQDHLRH 360
  361 ARQAYKTAHS ARASTQREVT TLLARKDGWS PLDLERFTTL YRQDHQLETE AQRAARELTE 420
  421 AEDDEARLSA ALTNGIMRRY HEEQVWSDRI RRASTWGTWG LMGVNILLFL VLQFVAEPWR 480
  481 RRRLVRSIAE GEKPMMDEVK QELEAVRGAL AAFEKSTAAA AAAAVQATPA AEPALSSAQA 540
  541 FVDQVEVVGT APDEVVVIAG TDPEPTSPPP QPWTEVIVDP KLWGPVLSDL YSERRIDLTM 600
  601 REVSIIALEG ALAGAVIFAG AFALLVRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle